Immunology and molecular pathologies

Course objectives

Learning results This course is aimed at providing an overview of the most important cellular and molecular mechanisms involved in the regulation of the immune response. The factors regulating immune system will be put in relation to the molecular mechanisms governing resistance against pathogens and promoting pathologies related to a defective immune response. Specific aims Student will acquire fundamental knowledge on - how immune cells function and interplay to participate to immune responses - how immune system protects us from pathogens and how mechanisms that inhibit immune responses lead to disease state. - how interpretation of transcriptomic and proteomic data helps to elucidate mechanisms of development of the immune response. At the end of the course, students will be able to explain how immune system works and to understand and explain data obtained from multiparametric analysis of immune cell function at transcriptional and post-transcriptional levels. The use of bioinformatics tools to clarify the molecular processes underlying pathologies and their use in diagnosis and treatment of diseases will be discussed. At the end of the course, students will be able to perform bibliographic searches in public scientific data banks (i.e. PubMed) to develop the topics covered in the course. This will be instrumental to identify the most recent methods of bioinformatic analysis used to approach immunology issues. The independent ability of the student to propose solutions to solve immunological questions is and aim of the course. Communication skills will be verified during the course by stimulating discussion and implemented by suggestions and the critical analysis of the slides presented during the course

Channel 1
GIOVANNI BERNARDINI Lecturers' profile

Program - Frequency - Exams

Course program
- Introduction to cells, organs and function of immune system - Role of innate immunity in generating specific immune responses. - The antigen-presenting cells (dendritic cells and macrophages). - T cell maturation and activation - B cell maturation and activation - Epigenetic modifications in immune cells. Mechanisms and analysis. Role in maturation and differentiation to effector cells. - Effector cell-mediated mechanisms. The role of helper T cells in determining the nature of the immune response. - The activation of macrophages: phagocytosis and cytolysis - Humoral immunity effector mechanisms. - Molecules involved in immunity to infection and mechanisms of viral immune evasion - Molecules involved in immunity to tumors and mechanisms of tumor immune evasion - High dimentional data in the immune system. Approaches for single cell analysis using flow cytometry and transcriptomic data e system.
Prerequisites
Although no prerequisite is required, the student should possess the knowledge of cellular and molecular biology and microbiology
Books
A.K. Abbas, A.H. Lichtman, S. Pillai. BASIC IMMUNOLOGY. Function and disorders of the Immune System 5TH edition, Masson. C.A. Janeway, K. Murphy, P. Travers, M. Walport. IMMUNOBIOLOGY, Piccin.
Teaching mode
Frontal lessons in classroom. During lessons, professor show power point slides to explain the topic of the course. Hands on training for: single cell analysis using flow cytometry using flow cytometry epigenetic data using IGV software
Frequency
Attendance is not mandatory but strongly recommended. Students will be also invited to attend seminars on bioinformatics applied to biomedicine topics, held by national and international speakers. Also in this case, attendance is not mandatory.
Exam mode
A written progress test (anonymous) with multiple choices is provided during the course to evaluate the level of preparation achieved The objective of the exam consists in verifying the achievement of the previously indicated training objectives Oral test with open stimulus and open answers
Bibliography
Slides and articles provided by the professors
Lesson mode
Frontal lessons in classroom. During lessons, professor show power point slides to explain the topic of the course. Hands on training for: single cell analysis using flow cytometry using flow cytometry epigenetic data using IGV software
GIUSEPPE SCIUME' Lecturers' profile

Program - Frequency - Exams

Course program
Introduction to cells, organs and function of immune system - Role of innate immunity in generating specific immune responses. - The antigen-presenting cells (dendritic cells and macrophages). - T cell maturation and activation - B cell maturation and activation - Epigenetic modifications in immune cells. Mechanisms and analysis. Role in maturation and differentiation to effector cells. - Effector cell-mediated mechanisms. The role of helper T cells in determining the nature of the immune response. - The activation of macrophages: phagocytosis and cytolysis - Humoral immunity effector mechanisms. - Molecules involved in immunity to infection and mechanisms of viral immune evasion - Molecules involved in immunity to tumors and mechanisms of tumor immune evasion - high dimensional data in the immune system: approaches for single cell analysis using flow cytometry and transcriptomic data
Prerequisites
Although no prerequisite is required, the student should possess the knowledge of cellular and molecular biology and microbiology
Books
slides and articles are provided by the professors
Teaching mode
Frontal lesson, lecture, using power point slides.
Frequency
Mandatory
Exam mode
A written progress tests (anonymous) with multiple choices is provided during the course to evaluate the level of preparation achieved The objective of the exam consists in verifying the achievement of the previously indicated training objectives Oral test with open stimulus and open answers
Bibliography
slides and articles are provided by the professors
Lesson mode
Lesson methods: frontal and interactive, group and individual work; research and proposal by the students, simulation of debates, conference, discussion group on clinical cases, news and interviews, teachers aids of various kinds: Handouts – scientific articles and journals- websites – pdf textbooks.
  • Lesson code1049260
  • Academic year2025/2026
  • CourseBioinformatics
  • CurriculumSingle curriculum
  • Year2nd year
  • Semester2nd semester
  • SSDMED/04
  • CFU6